Stem-loop eca-mir-8943

Accession

MI0028089

Description

Equus caballus eca-mir-8943 precursor miRNA

Sequence

16 reads, 2 reads per million, 1 experiments

uaaccaggccgcaaaggcuguagggAGGCUGGGCUAUAGGCCCGUGGGCcggagaggagcgggcugaaaccgaggaagcuguggcuuagcacugaacggagccgucugaagug
....(((((......((((.(....((((((((((((((((((((...((.....)).))))))..............)))))))))))).))....).))))))))).....

Structure

-uaac     cgcaaa    g aggg  -            --------------      GGG  g 
     caggc      ggcu u    AG GCUGGGCUAUAG              GCCCGU   Cc g
     |||||      |||| |    || ||||||||||||              ||||||   || a
     gucug      ccga g    uc cgauucgguguc              cgggcg   gg g
gugaa     ------    g caag  a            gaaggagccaaagu      --a  a 

Annotation confidence Not enough data

Genome context

NW_001867919.1: 133606-133718 [-]

Mature eca-miR-8943

• Accession: MIMAT0034472
• Description: Equus caballus eca-miR-8943 mature miRNA
• Sequence: 26 - AGGCUGGGCUAUAGGCCCGUGGGC - 49
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545