Stem-loop eca-mir-8949

Accession

MI0028096

Description

Equus caballus eca-mir-8949 precursor miRNA

Sequence

2 reads, 0 reads per million, 1 experiments

ccaguucugcuccaugagccgccgccacugcauggcuguggacaggugaguguugugguuccgugcccaggaacuGAACCAGGGCCACUGAACCUuaaccccuaggccaucagggcuggcucaguguuacauggu
(((.....((....(((((((..(((.(((.((((((..((..((((.((((((.((((((.((........)).)))))).)).))))..)))).....))..)))))))))))))))))))..))....))).

Structure

-   guucu  ucca       cc   a   c      gu  ---ac    -g    -  g      c  gcc 
 cca     gc    ugagccg  gcc cug auggcu  gg     aggu  agug uu ugguuc gu   c
 |||     ||    |||||||  ||| ||| ||||||  ||     ||||  |||| || |||||| ||    
 ggu     ug    acucggu  cgg gac uaccgg  cc     UCCA  UCAC GG ACCAAG ca   a
u   -acau  --ug       --   -   -      au  ccaau    AG    C  G      u  agg 

Annotation confidence Not enough data

Genome context

chr23: 53682898-53683032 [-]

Mature eca-miR-8949

• Accession: MIMAT0034478
• Description: Equus caballus eca-miR-8949 mature miRNA
• Sequence: 76 - GAACCAGGGCCACUGAACCU - 95
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545