Accession
MI0028102
Description
Equus caballus
eca-mir-3959 precursor miRNA
Sequence
137085
reads,
168.0
reads per million, 155 experiments
gccgaguguuguccaugauaggggaauggauGGUUGAUCAGAGAACAUACAUUuuaucaaugaUGUAUGUCAACUGAUCCACAGUCccuaccuauccagagacuucucagg
.(((((....((((..((((((.....((((.((.((((((...(((((((((........)))))))))...)))))).)).))))...))))))..).)))..))).))
.(((((....((((..((((((.....((((.((.((((((...(((((((((........)))))))))...)))))).)).))))...))))))..).)))..))).))
Structure
g - uguu - au ggaau G U AGA uua cc gag guc c gauagg ggau GU GAUCAG ACAUACAUU u || ||| ||| | |||||| |||| || |||||| ||||||||| gg cuc cag g cuaucc cCUG CA CUAGUC UGUAUGUag c - a --uu a ac --auc A C AAC uaa
Annotation confidence
High
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Genome context
24: 43360172-43360282 [+]
Clustered miRNAs
17 other miRNAs are < 10 kb from eca-mir-3959
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature eca-miR-3959-5p
| Accession | MIMAT0061128 |
| Description | Equus caballus eca-miR-3959-5p mature miRNA |
| Sequence | 32 - GGUUGAUCAGAGAACAUACAUU - 53 |
| Evidence |
experimental
Illumina [1] |
Mature eca-miR-3959-3p
| Accession | MIMAT0034484 |
| Description | Equus caballus eca-miR-3959-3p mature miRNA |
| Sequence | 64 - UGUAUGUCAACUGAUCCACAGUC - 86 |
| Evidence |
experimental
Illumina [1] |
References
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