Stem-loop eca-mir-8957

Accession

MI0028110

Description

Equus caballus eca-mir-8957 precursor miRNA

Sequence

90 reads, 14 reads per million, 1 experiments

aagcccagaacaagggucacuggauguggguucaguuugccuugugaacuuagugguuguucuggggcagcucucgucacUGCCUUCUCUGAGCCACCCUAUUCAuccaggagaacucaggaccugccagcccgagccuucucac
..((((.......))))..(((((((((((...(((((((...)))))))..((((((.....(((((((.........))))))).....))))))))))..)))))))((((((((.((.(......))).)))..)))))..

Structure

----------------aagcccagaacaaggguca       --    uucaguuugccuugugaacuua      guucu       cuc 
                                   cuggaug  uggg                      gugguu     ggggcag   u
                                   |||||||  ||||                      ||||||     |||||||   c
                                   gaccuAC  AUCC                      CACCGA     UUCCGUc   g
cacucuuccgagcccgaccguccaggacucaagag       UU    ----------------------      GUCUC       acu 

Annotation confidence Not enough data

Genome context

chr21: 2287480-2287624 [+]

Mature eca-miR-8957

• Accession: MIMAT0034491
• Description: Equus caballus eca-miR-8957 mature miRNA
• Sequence: 81 - UGCCUUCUCUGAGCCACCCUAUUCA - 105
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545