Stem-loop eca-mir-8963

Accession

MI0028117

Description

Equus caballus eca-mir-8963 precursor miRNA

Sequence

2 reads, 0 reads per million, 1 experiments

guggaacuugaaggaagggcagaguaagagggaugggguuuccuggccacccagggcacacagucuggcacuggccggUCCAAGCUGGGUCCUGUGCCAGGgagucucuggacuucuugaugugccccuucugggcacugu
(((...((.(((((...((((.(.(((((((..((((((((((((((....((((((.(.(((((((((....))))).....))))))))))).))))))))).)))))..))))))).).))))))))).)).)))...

Structure

---   gaa  u     aag    g g       ga     -         cacc      a a    -----     a 
   gug   cu gaagg   ggca a uaagagg  ugggg uuuccuggc    cagggc c cagu     cuggc c
   |||   || |||||   |||| | |||||||  ||||| |||||||||    |||||| | ||||     |||||  
   cac   gg cuucc   ccgu u guucuuc  gucuc gagGGACCG    GUCCUG G GUCG     ggccg u
ugu   --g  u     ---    g a       ag     u         ---U      - -    AACCU     g 

Annotation confidence Not enough data

Genome context

chr22: 49446986-49447126 [-]

Mature eca-miR-8963

• Accession: MIMAT0034498
• Description: Equus caballus eca-miR-8963 mature miRNA
• Sequence: 79 - UCCAAGCUGGGUCCUGUGCCAGG - 101
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545