Stem-loop eca-mir-8965

Accession

MI0028119

Description

Equus caballus eca-mir-8965 precursor miRNA

Sequence

3 reads, 0 reads per million, 1 experiments

gagcuccccgaggguucggagacuggcuaacugggagugcucucggccaugggaggccccUUCCCACAUGGCUGCAGUCCUGGCCucuccauuuaucccuuccug
((((((.....))))))(((((..((((....((((.(((....((((((((((((...)))))))..)))))))).)))))))))))))...............

Structure

gagcuccccgaggguuc     cu    aacu    g   ucuc     --       c 
                 ggaga  ggcu    ggga ugc    ggcca  ugggagg  
                 |||||  ||||    |||| |||    |||||  ||||||| c
                 ccucu  CCGG    UCCU ACG    UCGGU  ACCCUUc  
--guccuucccuauuua     --    ----    G   ----     AC       c 

Annotation confidence Not enough data

Genome context

chr22: 26836787-26836891 [+]

Mature eca-miR-8965

• Accession: MIMAT0034500
• Description: Equus caballus eca-miR-8965 mature miRNA
• Sequence: 61 - UUCCCACAUGGCUGCAGUCCUGGCC - 85
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545