Stem-loop eca-mir-8966

Accession

MI0028120

Description

Equus caballus eca-mir-8966 precursor miRNA

Sequence

3 reads, 0 reads per million, 1 experiments

cuggguuucagccuugggguaucuuuuggaagcuugggaaagcaagaguugggcuuucacccccuaaggAGGGGACCCUCUCUGCCCUcuccuugcuccaugccaaggcugccugagcuccca
..(((((((((((((((.(.......((((.((..((((..(((.(((..(((...((.(((((...)).)))))))).))))))..)).))..))))))).)))))))))...))))))...

Structure

-cu      ---         g uaucuuu    a  uu  -  aa   a   uu   cuu  a   -  u 
   ggguuu   cagccuugg g       ugga gc  gg ga  gca gag  ggg   uc ccc cc  
   ||||||   ||||||||| |       |||| ||  || ||  ||| |||  |||   || ||| || a
   cucgag   gucggaacc u       accu cg  cc cU  CGU CUC  CCC   AG GGG gg  
acc      ucc         g -------    -  uu  u  CC   -   -U   ---  -   A  a 

Annotation confidence Not enough data

Genome context

chr22: 20479829-20479951 [-]

Mature eca-miR-8966

• Accession: MIMAT0034501
• Description: Equus caballus eca-miR-8966 mature miRNA
• Sequence: 70 - AGGGGACCCUCUCUGCCCU - 88
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545