Stem-loop eca-mir-7177a

Accession

MI0028123

Description

Equus caballus eca-mir-7177a precursor miRNA

Sequence

106 reads, 0.0 reads per million, 53 experiments

guucaccuuuuggagguggauuacacuuuUCAGGACACCAGAGGACCAUAGAGCaaauuacuucuuccagagugcUAAAUGAUCCCCUGGUGCCCUAGAAagagccguuuaccuccaaaaggugaguuguuuauu
.((((((((((((((((((((..(.(((((.(((.((((((.(((.(((..((((......((((...))))))))..))).))).)))))).))).))))).)..)))))))))))))))))))).........

Structure

--------g                    ua a     C   A      A   C   AG    aauuac    u 
         uucaccuuuuggagguggau  c cuuuU AGG CACCAG GGA CAU  AGCa      uucu  
         ||||||||||||||||||||  | ||||| ||| |||||| ||| |||  ||||      |||| c
         gaguggaaaaccuccauuug  g gaAAG UCC GUGGUC CCU GUA  Ucgu      gaga  
uuauuuguu                    cc a     A   C      C   A   AA    ------    c 

Annotation confidence High

Genome context

5: 30021964-30022098 [-]

Mature eca-miR-7177a-5p

• Accession: MIMAT0051516
• Description: Equus caballus eca-miR-7177a-5p mature miRNA
• Sequence: 30 - UCAGGACACCAGAGGACCAUAGAGC - 54
• Evidence: experimental ; Illumina [1]

Mature eca-miR-7177a-3p

• Accession: MIMAT0034504
• Description: Equus caballus eca-miR-7177a-3p mature miRNA
• Sequence: 76 - UAAAUGAUCCCCUGGUGCCCUAGAA - 100
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545