Stem-loop eca-mir-8969

Accession

MI0028125

Description

Equus caballus eca-mir-8969 precursor miRNA

Sequence

acagcagacauaggaaaggggcacaggcuggccuccugcaaucagcagaggugguucagugggagaagccauccccUGGGCUUUCUGUGCUGAUGGGgucaugcagcuuguuuguguaauuacugaaaaggcaauuu
.(((...(((((((.(((..(((.....(((((((.....(((((((.(((.(((((((.((((.......))))))))))).))).)))))))))))))))))..))).))))))).....)))............

Structure

-----------a   --cag       a   gg   caggc       cugca       g   u       u    ga 
            cag     acauagg aag  gca     uggccuc     aucagca agg gguucag ggga  a
            |||     ||||||| |||  |||     |||||||     ||||||| ||| ||||||| ||||  g
            guc     uguguuu uuc  cgu     acugGGG     UAGUCGU UCU UCGGGUc cccu  c
uuuaacggaaaa   auuaa       g   ga   -----       -----       G   U       -    ac 

Annotation confidence Not enough data

Genome context

chr5: 22925137-22925273 [-]

Mature eca-miR-8969

• Accession: MIMAT0034506
• Description: Equus caballus eca-miR-8969 mature miRNA
• Sequence: 77 - UGGGCUUUCUGUGCUGAUGGG - 97
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545