miRBase entry: eca-mir-8984

Stem-loop eca-mir-8984


Accession
MI0028140
Description
Equus caballus eca-mir-8984 precursor miRNA


Sequence

2728 reads, 109.0 reads per million, 12 experiments
uuuggcacuccuggggaagggaagagagugagcuggugaggggagcuggagcccugcuccCUCUGGCUUCUGUUCCCUCAggaaacucugcuguccuggaugaga
........((((((((((.(((((((((.((((.(((..((....))...)))..)))).))))..))))).))))).)))))..((((.(......).).))).

Structure
--------------uuuggcac     -     g     --    u    -u   -ga  g 
                      uccug gggaa ggaag  agag gagc  ggu   gg g
                      ||||| ||||| |||||  |||| ||||  |||   ||  
                      aggAC CCCUU UCUUC  UCUC cucg  ccg   uc a
agaguagguccugucgucucaa     U     G     GG    c    uc   agg  g 


Annotation confidence Not enough data
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Genome context
7: 54182726-54182830 [-]

Database links

Mature eca-miR-8984-3p

Accession MIMAT0034521
Description Equus caballus eca-miR-8984-3p mature miRNA
Sequence 61 - CUCUGGCUUCUGUUCCCUCA - 80
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24692655
    Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
    "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
    "Mol Biol Evol (2014) 31:1536-1545