Stem-loop eca-mir-8995

Accession

MI0028153

Description

Equus caballus eca-mir-8995 precursor miRNA

Sequence

22750 reads, 23.0 reads per million, 117 experiments

aguuaaagcagccacgaugaagaagucuaagcuuugugguGGUGACGUAUUCCUGUUGACAUGcugucucucauuguauguguGUGUCAUCAGGGCUACGGUCCGUcacagagcgauagauggacugucugagcucacccc
((((...(((((((...........((((.((((((((((((...((((.(((((.((((((((.....(.....).....)))))))).))))).))))..))))))))))))..))))))).))))...))))......

Structure

------    aaa    -   cgaugaagaag    -a            UGA    U     U        ugucu u 
      aguu   gcag cca           ucua  gcuuugugguGG   CGUA UCCUG UGACAUGc     c c
      ||||   |||| |||           ||||  ||||||||||||   |||| ||||| ||||||||     | a
      ucga   uguc ggu           agau  cgagacacUGCC   GCAU GGGAC ACUGUGug     g u
ccccac    guc    a   -----------    ag            -UG    C     U        uguau u 

Annotation confidence High

Genome context

7: 95778447-95778587 [+]

Mature eca-miR-8995-5p

• Accession: MIMAT0034534
• Description: Equus caballus eca-miR-8995-5p mature miRNA
• Sequence: 41 - GGUGACGUAUUCCUGUUGACAUG - 63
• Evidence: experimental ; Illumina [1]

Mature eca-miR-8995-3p

• Accession: MIMAT0051524
• Description: Equus caballus eca-miR-8995-3p mature miRNA
• Sequence: 84 - GUGUCAUCAGGGCUACGGUCCGU - 106
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545