Stem-loop eca-mir-8998

Accession

MI0028157

Description

Equus caballus eca-mir-8998 precursor miRNA

Sequence

5 reads, 1 reads per million, 1 experiments

uccguggcugaguggUUAAGUUCACGCACUCUGGGAUUUCauugguuggaauccuaggagcggacaugacacagcucaucgagucgcgcuaaggu
..((((((((((((((((.((.(.(((.(.(((((((((((.....)))))))))))).)))))).)))).)).)))....))))))).......

Structure

-----uc       ----   -  -    A  U A   A U           u 
       cguggcu    gag ug gUUA GU C CGC C CUGGGAUUUCa u
       |||||||    ||| || |||| || | ||| | ||||||||||| g
       gcgcuga    cuc ac cagu ca g gcg g gauccuaaggu g
uggaauc       gcua   g  a    a  - -   a -           u 

Annotation confidence Not enough data

Genome context

chr7: 47443650-47443744 [-]

Mature eca-miR-8998

• Accession: MIMAT0034538
• Description: Equus caballus eca-miR-8998 mature miRNA
• Sequence: 16 - UUAAGUUCACGCACUCUGGGAUUUC - 40
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545