Stem-loop eca-mir-8993-2

Accession

MI0028160

Description

Equus caballus eca-mir-8993-2 precursor miRNA

Sequence

670 reads, 101 reads per million, 1 experiments

gggucucccacaaagaggucgcuucCUGCAGGGUCAAGGACAAGGUCAGGgaggccaugcucccuuccacaugugucccaggcccuugaucuuggacccuggacaucuggugugu
(((...)))(((.(((.(((........(((((((.(((((((((((.((((.((.(((..........))))).)))).)).))))).)))).)))))))))).)))..)))..

Structure

gggucuccc   -a   g   gcuucCUG       A    -     -  A    g  c   cucc 
         aca  aga guc        CAGGGUC AGGA CAAGG UC GGga gc aug    c
         |||  ||| |||        ||||||| |||| ||||| || |||| || |||     
         ugu  ucu cag        gucccag uucu guucc gg cccu ug uac    u
-------ug   gg   a   --------       g    a     c  a    g  -   accu 

Annotation confidence Not enough data

Genome context

chr7: 52508673-52508787 [-]

Mature eca-miR-8993

• Accession: MIMAT0034531
• Description: Equus caballus eca-miR-8993 mature miRNA
• Sequence: 26 - CUGCAGGGUCAAGGACAAGGUCAGG - 50
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545