Stem-loop eca-mir-9006

Accession

MI0028166

Description

Equus caballus eca-mir-9006 precursor miRNA

Sequence

gcucugugaccuugggugaguuaauuaaccucucugugucucuguagucucaucuauaaagcagaggugauacucaGGUUGUUGGGUGGACUCAGUUgacagguaugaaaugagaggacggccucagcaagugucug
.......(((((((..((((........(((((((.((((.(((.((((.((((((..((.(.(((......))).).))..)))))))))))))..)))).)........)))))).....)))).)))).)))..

Structure

gcucugu   -    gg    uuaauuaa      -------- g    -u   u    u      ua  g a   gu 
       gac cuug  ugag        ccucuc        u uguc  cug aguc caucua  aa c gag  g
       ||| ||||  ||||        ||||||        | ||||  ||| |||| ||||||  || | |||   
       cug gaac  acuc        ggagag        g acag  GAC UCAG GUGGGU  UU G cuc  a
-----gu   u    -g    ---cggca      uaaaguau g    UU   -    -      UG  G a   au 

Annotation confidence Not enough data

Genome context

chr8: 24079632-24079768 [-]

Mature eca-miR-9006

• Accession: MIMAT0034546
• Description: Equus caballus eca-miR-9006 mature miRNA
• Sequence: 77 - GGUUGUUGGGUGGACUCAGUU - 97
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545