Stem-loop eca-mir-9023

Accession

MI0028187

Description

Equus caballus eca-mir-9023 precursor miRNA

Sequence

8 reads, 1 reads per million, 1 experiments

aagcagcuuuguccuggacuucagcgagcuUUGUAUUAAUACGGUAGGUAGUGugggugugaaaucacacugcugcuggaaucgagguugcugagcuggaaguggggcgaggacgcguuag
..((..(((((((((..((((((((.(((............((((((.((((((((........))))))))))))))...........)))..))).))))))))))))))..)).....

Structure

---aa  ag         gg     -   -g   uUUGUAUUAAUA      G        gug 
     gc  cuuuguccu  acuuc agc  agc            CGGUAG UAGUGugg   u
     ||  |||||||||  ||||| |||  |||            |||||| ||||||||    
     cg  ggagcgggg  ugaag ucg  ucg            gucguc gucacacu   g
gauug  ca         --     g   ag   -uuggagcuaag      -        aaa 

Annotation confidence Not enough data

Genome context

chr26: 39963492-39963612 [-]

Mature eca-miR-9023

• Accession: MIMAT0034565
• Description: Equus caballus eca-miR-9023 mature miRNA
• Sequence: 31 - UUGUAUUAAUACGGUAGGUAGUG - 53
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545