Stem-loop eca-mir-9024

Accession

MI0028188

Description

Equus caballus eca-mir-9024 precursor miRNA

Sequence

611 reads, 5 reads per million, 1 experiments

aaggccuggugggugcacaggaagggagcagugcagaugcuucucccugggaggcuggccCAGGGACUCUGCCAUGUUCUCCAUUgugccugccuuggggucagc
..(((((((((((((((..(((...(((((..(((((.(....((((((((.......))))))))))))))..))))))))..))))))))))...)))))...

Structure

-aa     ---          ca   agg     gu     u cuuc        ag 
   ggccu   ggugggugca  gga   gagca  gcaga g    ucccuggg  g
   |||||   ||||||||||  |||   |||||  ||||| |    ||||||||  c
   cuggg   ccguccgugU  CCU   CUUGU  CGUCU C    AGGGACcc  u
cga     guu          UA   ---     AC     - ----        gg 

Annotation confidence Not enough data

Genome context

chr26: 628446-628550 [+]

Mature eca-miR-9024

• Accession: MIMAT0034566
• Description: Equus caballus eca-miR-9024 mature miRNA
• Sequence: 61 - CAGGGACUCUGCCAUGUUCUCCAUU - 85
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545