Stem-loop eca-mir-9031

Accession

MI0028195

Description

Equus caballus eca-mir-9031 precursor miRNA

Sequence

1 reads, 0 reads per million, 1 experiments

uucacgcccaugagauuggcaaaaauuaaaugcugcgauaaccaaguguugguaagguugugguuacauacugcuaguggGAAUGUAACUGGACCCAGCCACCUUggagagcaguauagugauguccaguugaaggagggcaaac
.....((((.(..((((((((...((((..((((((.....(((((.((.(((..((((..((((((((.((.......)).)))))))).))))..))))))))))...))))))))))..)).))))))....).))))....

Structure

uucac    a --ga      -  aaa    aa      gauaa     u  u   aa    gu        a  gc 
     gccc u    gauugg ca   auua  ugcugc     ccaag gu ggu  gguu  gguuacau cu  u
     |||| |    |||||| ||   ||||  ||||||     ||||| || |||  ||||  |||||||| ||  a
     cggg g    uugacc gu   ugau  augacg     ggUUC CA CCG  CCAG  UCAAUGUA Gg  g
-caaa    a gaag      u  -ag    --      --aga     -  -   AC    -G        A  gu 

Annotation confidence Not enough data

Genome context

chr25: 3622833-3622977 [+]

Mature eca-miR-9031

• Accession: MIMAT0034573
• Description: Equus caballus eca-miR-9031 mature miRNA
• Sequence: 81 - GAAUGUAACUGGACCCAGCCACCUU - 105
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545