Stem-loop eca-mir-9034

Accession

MI0028198

Description

Equus caballus eca-mir-9034 precursor miRNA

Sequence

105 reads, 14 reads per million, 1 experiments

ggccaggugguuaaguucaugugcucugcuucgguagccugggguuuauggguucagaugcuggguguggaccuacacaCCACUCAUUAAGCCGUACUGUGGCagugucccacauagaagaacuagaaugaccuacaacuagg
....((((.(((.(((((((((((.(((((.((((.....(.(((((((((((.(((...)))((((((......))))))))))).)))))).))))).))))).)...)))))....)))))..))).)))).........

Structure

-----ggcc    g   -a     ----     --- u     u    agccu g      -     ucagaugcug      ga 
         aggu guu  aguuc    augug   c cugcu cggu     g gguuua ugggu          ggugug  c
         |||| |||  |||||    |||||   | ||||| ||||     | |||||| |||||          ||||||   
         ucca uaa  ucaag    uacac   g gaCGG GUCA     U CCGAAU ACUCA          CCacac  c
ggaucaaca    g   ga     aaga     ccu u     U    ----- G      U     ----------      au 

Annotation confidence Not enough data

Genome context

chr25: 39205787-39205929 [+]

Mature eca-miR-9034

• Accession: MIMAT0034576
• Description: Equus caballus eca-miR-9034 mature miRNA
• Sequence: 80 - CCACUCAUUAAGCCGUACUGUGGC - 103
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545