Stem-loop eca-mir-9040

Accession

MI0028204

Description

Equus caballus eca-mir-9040 precursor miRNA

Sequence

3 reads, 0 reads per million, 1 experiments

gaugccugugcuggaacugacugacugcuggcauccugcaaggcagugugggauggaacACUGUCCUACCGGAUGCCAGUAGCcagaguccccaccucuuuca
((.....(((..(((.((..(((.((((((((((((.(..(((((((((........)))))).)))..))))))))))))).)))))))).))).....)).

Structure

-  ugccu   cu   a  ga   a            u ca   -      ggg 
 ga     gug  gga cu  cug cugcuggcaucc g  agg cagugu   a
 ||     |||  ||| ||  ||| |||||||||||| |  ||| ||||||    
 cu     cac  ccu ga  gac GAUGACCGUAGG C  UCC GUCAca   u
a  uucuc   -c   -  --   C            - CA   U      agg 

Annotation confidence Not enough data

Genome context

chr25: 38044698-38044800 [+]

Mature eca-miR-9040

• Accession: MIMAT0034582
• Description: Equus caballus eca-miR-9040 mature miRNA
• Sequence: 60 - ACUGUCCUACCGGAUGCCAGUAGC - 83
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545