Stem-loop eca-mir-9053

Accession

MI0028224

Description

Equus caballus eca-mir-9053 precursor miRNA

Sequence

3 reads, 0 reads per million, 1 experiments

aucaaguuuuccuuggguuuuccaccuuaagugagaguuuuaauugaugagauguaacuggcagugcuccucaaacuacUACACAUCUGAUCACCUGGGCGUCuugugaaaggguggauuugacccagcauucuggagugggg
........(((((((((((.((((((((...(((((((((....((((.((((((...(((.(((.........))).))).)))))).))))...)))).)))))....))))))))...)))))))......)))).....

Structure

aucaaguu    ------       --u        -aag     -    uaau    g      aac   c   gcu 
        uucc      uuggguu   uccaccuu    ugaga guuu    ugau agaugu   ugg agu   c
        ||||      |||||||   ||||||||    ||||| ||||    |||| ||||||   ||| |||   c
        gagg      gacccag   agguggga    guuCU CGGG    ACUA UCUACA   AUc uca   u
---ggggu    ucuuac       uuu        aagu     G    -UCC    G      --C   a   aac 

Annotation confidence Not enough data

Genome context

chr1: 36440087-36440229 [-]

Mature eca-miR-9053

• Accession: MIMAT0034597
• Description: Equus caballus eca-miR-9053 mature miRNA
• Sequence: 80 - UACACAUCUGAUCACCUGGGCGUC - 103
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545