Stem-loop eca-mir-9055

Accession

MI0028226

Description

Equus caballus eca-mir-9055 precursor miRNA

Sequence

3 reads, 0 reads per million, 1 experiments

augggcaguguccugAGAGAGCACCAAGGGAGCUGCGUggggcuauuuaucacagcgucccuccgugcugucccauggcuuggaaccaaaa
.(((.(((.(((.((.((.(((((..(((((((((.(((((....)))).).)))).)))))..))))).)).)).))))))...)))...

Structure

--a   --g   u   c  A  G     CA     -    C -    g 
   ugg   cag guc ug GA AGCAC  AGGGA GCUG G Uggg c
   |||   ||| ||| || || |||||  ||||| |||| | ||||  
   acc   guu cgg ac cu ucgug  ucccu cgac c auuu u
aaa   aag   -   u  c  g     cc     g    a u    a 

Annotation confidence Not enough data

Genome context

chr1: 92819756-92819846 [+]

Mature eca-miR-9055

• Accession: MIMAT0034599
• Description: Equus caballus eca-miR-9055 mature miRNA
• Sequence: 16 - AGAGAGCACCAAGGGAGCUGCGU - 38
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545