Accession
MI0028231
Description
Equus caballus
eca-mir-3548 precursor miRNA
Sequence
101
reads,
13
reads per million, 1 experiments
cuccccagcgggcggcagugggucaccuuugaacaucguuaccagacaguguuagagucgagccgagaaaucCAGCACUGUCCGGUAAGAUGCCcacaggggcccaggcgccucagccugaggacgugg
.(((.(((((((((.(..((((((.(((.((..((((.(((((.(((((((((.((.((.......))..)).))))))))).)))))))))..)).)))))))))).)))))..).))).))).....
.(((.(((((((((.(..((((((.(((.((..((((.(((((.(((((((((.((.((.......))..)).))))))))).)))))))))..)).)))))))))).)))))..).))).))).....
Structure
----c c - -- g ag a u aa g a a -g ga
ucc cag c gggcg c uggguc ccu ug cauc uuacc gacaguguu ga uc g
||| ||| | ||||| | |||||| ||| || |||| ||||| ||||||||| || || c
agg guc g uccgc g acccgg gga ac GUAG AAUGG CUGUCACGA cu ag c
ggugc a c ac g -- - c CC - C C aa ag
Annotation confidence
High
Do you think this miRNA is real?
Genome context
chr2: 48454387-48454515 [+]
Clustered miRNAs
3 other miRNAs are < 10 kb from eca-mir-3548
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature eca-miR-3548
| Accession | MIMAT0034603 |
| Description | Equus caballus eca-miR-3548 mature miRNA |
| Sequence | 73 - CAGCACUGUCCGGUAAGAUGCC - 94 |
| Evidence |
experimental
Illumina [1] |
References
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