Stem-loop eca-mir-9062

Accession

MI0028235

Description

Equus caballus eca-mir-9062 precursor miRNA

Sequence

6 reads, 1 reads per million, 1 experiments

uccguuggagaagacacugcuggcugcucaugcaccgugggcucuguaggagagaaccuCAGAGUUGGUAAUGGAGCCCCAGCagcgauuugccagcaaaucu
...(((((.(((..(.(((((((..((((....((((...((((((.(((......)))))))))))))....)))).))))))).).))).)))))......

Structure

---ucc     a   ga a       cu    augc    ugg      u   ag 
      guugg gaa  c cugcugg  gcuc    accg   gcucug agg  a
      ||||| |||  | |||||||  ||||    ||||   |||||| |||   
      cgacc uuu  g gaCGACC  CGAG    UGGU   UGAGAC ucc  g
ucuaaa     g   -a c       -C    GUAA    ---      -   aa 

Annotation confidence Not enough data

Genome context

chr2: 33977663-33977765 [-]

Mature eca-miR-9062

• Accession: MIMAT0034607
• Description: Equus caballus eca-miR-9062 mature miRNA
• Sequence: 60 - CAGAGUUGGUAAUGGAGCCCCAGC - 83
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545