Stem-loop eca-mir-9070

Accession

MI0028243

Description

Equus caballus eca-mir-9070 precursor miRNA

Sequence

6 reads, 1 reads per million, 1 experiments

aggggccacuggauggcugggucacaggugguacaaaggaucagccauucuugggccguugggcaaccacUGAGAUGAGGCUGUGUUCCACAGGUgugauguuuacacuggcccuucaccaggca
.(((((((.((...(((...((((((.((((.(((......(((((..(((((((((....))).....))))))...)))))))).))))...)))))))))..)).)))))))..........

Structure

---------a       c  gau   ugg      --g    u   aaggau     -au      -----   g 
          ggggcca ug   ggc   gucaca   gugg aca      cagcc   ucuugg     gcc u
          ||||||| ||   |||   ||||||   |||| |||      |||||   ||||||     |||  
          ucccggu ac   uug   uagugU   CACC UGU      GUCGG   AGAGUc     cgg u
acggaccacu       c  -au   ---      GGA    U   ------     AGU      accaa   g 

Annotation confidence Not enough data

Genome context

chr3: 119160267-119160391 [-]

Mature eca-miR-9070

• Accession: MIMAT0034615
• Description: Equus caballus eca-miR-9070 mature miRNA
• Sequence: 71 - UGAGAUGAGGCUGUGUUCCACAGGU - 95
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545