Stem-loop eca-mir-9071

Accession

MI0028244

Description

Equus caballus eca-mir-9071 precursor miRNA

Sequence

1 reads, 0 reads per million, 1 experiments

cugccaccucguggccauauugagaacugcuccaaagggagcuggggcugggcgugcagaggugucauuuUGCCACCGCUCUUUGGAGCCUGCUCggguaguucccugaggucugcaacuucauc
..(((((...)))))......(((....(((((((..(((((.(((((..((((........)))).....))).))))))))))))))...)))(((.....)))((((((.....))))))..

Structure

---------cugccaccucguggccauauu   aacu       ag     u  -   ---ug    ugc 
                              gag    gcuccaa  ggagc gg ggc     ggcg   a
                              |||    |||||||  ||||| || |||     ||||    
                              CUC    CGAGGUU  UCUCG CC CCG     cugu   g
cuacuucaacgucuggagucccuugauggg   -GUC       --     -  A   Uuuua    gga 

Annotation confidence Not enough data

Genome context

chr3: 114891954-114892078 [+]

Mature eca-miR-9071

• Accession: MIMAT0034616
• Description: Equus caballus eca-miR-9071 mature miRNA
• Sequence: 71 - UGCCACCGCUCUUUGGAGCCUGCUC - 95
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545