Stem-loop eca-mir-9074

Accession

MI0028247

Description

Equus caballus eca-mir-9074 precursor miRNA

Sequence

3 reads, 0 reads per million, 1 experiments

acugcuacgccauugggcugcccucauuuuguuuuaauugUGACUAAUAGGAAAUUUUAAGUGACacccuggcugcauuuaguuucuguuggacaacucugggcaaaggggcagcaucacuggugucggugacauggagagaggc
((((..((((((.(((((((((((...(((((((...((((..((((((((((...(((((((.((.......)))))))))))))))))))))))....))))))))))))))).))).))))))))))...............

Structure

---------------    cu      u   -        cau       -uaa    GA          AUU       A  cc 
               acug  acgcca ugg gcugcccu   uuuguuu    uugU  CUAAUAGGAA   UUAAGUG Ca  c
               ||||  |||||| ||| ||||||||   |||||||    ||||  ||||||||||   ||||||| ||  u
               uggc  uguggu acu cgacgggg   aaacggg    aaca  gguugucuuu   gauuuac gu  g
cggagagagguacag    --      c   a        ---       ucuc    --          ---       -  cg 

Annotation confidence Not enough data

Genome context

chr3: 35919148-35919292 [+]

Mature eca-miR-9074

• Accession: MIMAT0034619
• Description: Equus caballus eca-miR-9074 mature miRNA
• Sequence: 41 - UGACUAAUAGGAAAUUUUAAGUGAC - 65
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545