Stem-loop eca-mir-9081

Accession

MI0028254

Description

Equus caballus eca-mir-9081 precursor miRNA

Sequence

744 reads, 6.0 reads per million, 88 experiments

guuucaauucagugcguacuuucaaauaucuugggagcuuUUAGACAAUACUGAUGCCUGGGCuccauuugcuagaaauguccaguaauuggccuuggguaaggcccagguaucaguauuguuuagaaauuccccagacaa
............................(((.(((((.(((((((((((((((((((((((((((((.(((((.((....)).))))).)))..........)))))))))))))))))))))))))).))))).)))...

Structure

guuucaauucagugcguacuuucaaaua   u     c                          ----------   u     a  a 
                            ucu gggag uuUUAGACAAUACUGAUGCCUGGGCu          cca uugcu ga a
                            ||| ||||| ||||||||||||||||||||||||||          ||| ||||| ||  
                            aga cccuu aagauuuguuaugacuauggacccgg          ggu aauga cu u
-------------------------aac   c     a                          aauggguucc   u     c  g 

Annotation confidence Not enough data

Genome context

4: 44917152-44917292 [-]

Mature eca-miR-9081-5p

• Accession: MIMAT0034626
• Description: Equus caballus eca-miR-9081-5p mature miRNA
• Sequence: 41 - UUAGACAAUACUGAUGCCUGGGC - 63
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545