Stem-loop eca-mir-9085

Accession

MI0028258

Description

Equus caballus eca-mir-9085 precursor miRNA

Sequence

3 reads, 0 reads per million, 1 experiments

cuuuguaaaagaaaaauccugcccgccuuuugauaagcguucucauuaugcuuucauuuacuacaggCUUAAUGAAAAGGCUUAUCAAAagggaggcaggauccacuuuauaaaaacaa
.((((((((.(....((((((((..(((((((((((((.((.((((((.((((...........)))).)))))).)).)))))))))))))..))))))))...))))))))).....

Structure

----c        a aaaa        cg             g  c      u    ucau 
     uuuguaaa g    auccugcc  ccuuuugauaagc uu ucauua gcuu    u
     |||||||| |    ||||||||  ||||||||||||| || |||||| ||||    u
     aaauauuu c    uaggacgg  ggaAAACUAUUCG AA AGUAAU Cgga    a
aacaa        - -acc        ag             G  A      U    cauc 

Annotation confidence Not enough data

Genome context

chr10: 50687425-50687543 [-]

Mature eca-miR-9085

• Accession: MIMAT0034630
• Description: Equus caballus eca-miR-9085 mature miRNA
• Sequence: 68 - CUUAAUGAAAAGGCUUAUCAAA - 89
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545