Stem-loop eca-mir-9086

Accession

MI0028259

Description

Equus caballus eca-mir-9086 precursor miRNA

Sequence

gggcuggauccugagucccgggcccCUUGUCUGACCUCUCUCCCUGCAGggugugacucugacggaccugaaggaagcagagaaggccgcagggaaggccccagagccagaaa
((.((((..(((...((((..((.((((.((((.(((.((...(((((((((...)))))).)))....)))))...)))).))))..)).)))))))..))))..)).....

Structure

-----  -g    au   gag    gg  -c    G    --A   C  -UCC   -      g 
     gg  cugg  ccu   uccc  gc  cCUU UCUG   CCU UC    CUG CAGggu  
     ||  ||||  |||   ||||  ||  |||| ||||   ||| ||    ||| |||||| u
     cc  gacc  gga   aggg  cg  ggaa agac   gga ag    ggc gucuca  
aaaga  ga    cc   ---    -a  cc    g    gaa   -  ucca   a      g 

Annotation confidence Not enough data

Genome context

chr10: 24329439-24329551 [-]

Mature eca-miR-9086

• Accession: MIMAT0034631
• Description: Equus caballus eca-miR-9086 mature miRNA
• Sequence: 26 - CUUGUCUGACCUCUCUCCCUGCAG - 49
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545