Stem-loop eca-mir-9087

Accession

MI0028260

Description

Equus caballus eca-mir-9087 precursor miRNA

Sequence

1 reads, 0 reads per million, 1 experiments

ccagccccucugccuuguucugucucucaaaggcaUUGAGAUCCAGGACGCUGAGGgaaagacaggaaagcuucagggggucgggaaagucagccgccagcaagaggagaauaaaggcagacaggac
....((..(((((((((((((.(((((....(((.((((..(((.((.(.((((((..............)))))).)..)).)))...))))..)))....)))))))))).))))))))..))..

Structure

ccag  cc        -     g     caaa   -a    -GA   A  -A G      gaaaga 
    cc  ucugccuu guucu ucucu    ggc  UUGA   UCC GG  C CUGAGG      c
    ||  |||||||| ||||| |||||    |||  ||||   ||| ||  | ||||||       
    gg  agacggaa uaaga ggaga    ccg  gacu   agg cu  g gacuuc      a
--ca  ac        a     -     acga   cc    gaa   g  gg g      gaaagg 

Annotation confidence Not enough data

Genome context

chr10: 9579895-9580021 [-]

Mature eca-miR-9087

• Accession: MIMAT0034632
• Description: Equus caballus eca-miR-9087 mature miRNA
• Sequence: 36 - UUGAGAUCCAGGACGCUGAGG - 56
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545