Stem-loop eca-mir-9091

Accession

MI0028264

Description

Equus caballus eca-mir-9091 precursor miRNA

Sequence

2 reads, 0 reads per million, 1 experiments

aauugcaugccugagagccagcugcucaugggagacagaacuguaacuucagcgccuguguccugccucccagUAUAUGGACGGAGUCUGAAACAGugcgcucccagccccgcucucugaugcugggaugg
.(((.((.((..((((((.....(((...(((((.....(((((...(((((...((.((((((((......)))...))))).)).))))))))))...))))))))...))))))....)))).)))..

Structure

-a   g  u  --cu      cagcu   cau     acaga     aac     cgc  g     ---   cu 
  auu ca gc    gagagc     gcu   gggag     acugu   uucag   cu ugucc   ugc  c
  ||| || ||    ||||||     |||   |||||     |||||   |||||   || |||||   |||   
  uag gu cg    cucucg     cga   cccuc     uGACA   AAGUC   GA GCAGG   AUg  c
gg   g  -  uagu      --ccc   ---     --gcg     ---     --U  G     UAU   ac 

Annotation confidence Not enough data

Genome context

chr10: 8611271-8611401 [-]

Mature eca-miR-9091

• Accession: MIMAT0034636
• Description: Equus caballus eca-miR-9091 mature miRNA
• Sequence: 74 - UAUAUGGACGGAGUCUGAAACAG - 96
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545