Stem-loop eca-mir-9092

Accession

MI0028265

Description

Equus caballus eca-mir-9092 precursor miRNA

Sequence

4 reads, 1 reads per million, 1 experiments

ucugguuugguccugcgugacgucucugcccucacgccaaUGGCGAUCGUGCCAGAGGUGGUAUCugagaaagcaagacccacuuuuguuugcauggcucuguccauuggggagugcugauuguguuuauguaguuauaggccag
.((((((((...((((((((((..((.((.(((.(.(((((((((((((((((((((((((..(((.........))).)))))))))...)))))).)).).))))))))))).)).))...)).))))))))...))))))))

Structure

u        guc        -  -uc  u  c   a g       - -  -      ---         UA   gag 
 cugguuug   cugcguga cg   uc gc cuc c ccaaUGG C GA UCGUGC   CAGAGGUGG  UCu   a
 ||||||||   |||||||| ||   || || ||| | ||||||| | || ||||||   |||||||||  |||   a
 gaccggau   gauguauu gu   ag cg gag g gguuacc g cu gguacg   guuuucacc  aga   a
-        auu        u  guu  u  u   - -       u u  c      uuu         -c   acg 

Annotation confidence Not enough data

Genome context

chr10: 14584039-14584183 [-]

Mature eca-miR-9092

• Accession: MIMAT0034637
• Description: Equus caballus eca-miR-9092 mature miRNA
• Sequence: 41 - UGGCGAUCGUGCCAGAGGUGGUAUC - 65
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545