Stem-loop eca-mir-9093

Accession

MI0028266

Description

Equus caballus eca-mir-9093 precursor miRNA

Sequence

147 reads, 4.0 reads per million, 61 experiments

cagaaagucggcguugccuaggaacaagaucuucugggagCUGUAGUCCAUGUCCCCAGGCCcugggaguguccugcGCUGGAGGUGGGGACUACACCUcucagaaggcucugcagcagcgcguggggcaucugagggcac
((((...((((((((((...(((....(.(((((((((((.((((((((....((((((((...((((...)))))).)))).))...)))))))).)))))))))))))))...))))))).)))....)))).......

Structure

-------    -aag   -       cua   acaa a           C        AUGU  -    -  Ccu    g 
       caga    ucg gcguugc   gga    g ucuucugggag UGUAGUCC    CC CCAG GC   ggga  
       ||||    ||| |||||||   |||    | ||||||||||| ||||||||    || |||| ||   |||| u
       gucu    ggu cgcgacg   ucu    c ggaagacucUC ACAUCAGG    GG GGUC cg   uccu  
cacggga    acgg   g       acg   ---- -           C        -GGU  A    G  ---    g 

Annotation confidence High

Genome context

10: 28118316-28118456 [+]

Mature eca-miR-9093-5p

• Accession: MIMAT0034638
• Description: Equus caballus eca-miR-9093-5p mature miRNA
• Sequence: 41 - CUGUAGUCCAUGUCCCCAGGCC - 62
• Evidence: experimental ; Illumina [1]

Mature eca-miR-9093-3p

• Accession: MIMAT0051542
• Description: Equus caballus eca-miR-9093-3p mature miRNA
• Sequence: 78 - GCUGGAGGUGGGGACUACACCU - 99
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545