Stem-loop eca-mir-9093

Accession

MI0028266

Description

Equus caballus eca-mir-9093 precursor miRNA

Sequence

6 reads, 1 reads per million, 1 experiments

cagaaagucggcguugccuaggaacaagaucuucugggagCUGUAGUCCAUGUCCCCAGGCCCugggaguguccugcgcuggagguggggacuacaccucucagaaggcucugcagcagcgcguggggcaucugagggcac
((((...((((((((((...(((....(.(((((((((((.((((((((....((((((((...((((...)))))).)))).))...)))))))).)))))))))))))))...))))))).)))....)))).......

Structure

-------    -aag   -       cua   acaa a           C        AUGU  -    -  CCu    g 
       caga    ucg gcguugc   gga    g ucuucugggag UGUAGUCC    CC CCAG GC   ggga  
       ||||    ||| |||||||   |||    | ||||||||||| ||||||||    || |||| ||   |||| u
       gucu    ggu cgcgacg   ucu    c ggaagacucuc acaucagg    gg gguc cg   uccu  
cacggga    acgg   g       acg   ---- -           c        -ggu  a    g  ---    g 

Annotation confidence Not enough data

Genome context

chr10: 27647422-27647562 [+]

Mature eca-miR-9093

• Accession: MIMAT0034638
• Description: Equus caballus eca-miR-9093 mature miRNA
• Sequence: 41 - CUGUAGUCCAUGUCCCCAGGCCC - 63
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545