Stem-loop eca-mir-9089-2

Accession

MI0028270

Description

Equus caballus eca-mir-9089-2 precursor miRNA

Sequence

6 reads, 1 reads per million, 1 experiments

ucagcuuguuggcaggaguggaggaugaggauccaccuucugagcagggucuuucugugggugugUCACAGACAAGAACUCCCAGGGUGGguccuuccacccagauggcucagcc
...(((.(((..(.((.(((((.....((((((((((((.......((((((((((((((.....))))))).))))...)))))))))))))))))))))).)..)))..))).

Structure

uca   -u   gg a  a     ggaug            cugagca   ---    -       g 
   gcu  guu  c gg gugga     aggauccaccuu       ggg   ucuu ucugugg u
   |||  |||  | || |||||     ||||||||||||       |||   |||| ||||||| g
   cga  cgg  g cc caccu     uccugGGUGGGA       CCC   AGAA AGACACU u
--c   cu   ua a  -     -----            -------   UCA    C       g 

Annotation confidence Not enough data

Genome context

chr10: 26230948-26231062 [+]

Mature eca-miR-9089

• Accession: MIMAT0034634
• Description: Equus caballus eca-miR-9089 mature miRNA
• Sequence: 66 - UCACAGACAAGAACUCCCAGGGUGG - 90
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545