Stem-loop eca-mir-744

Accession

MI0028274

Description

Equus caballus eca-mir-744 precursor miRNA

Literature search

6 open access papers mention eca-mir-744
(14 sentences)

Sequence

211141 reads, 933.0 reads per million, 232 experiments

cuggguugggcaaggUGCGGGGCUAGGGCUAACAGCAGUcuuacugaagguuuccuggaaaccacgcacaugCUGUUGCCACUAACCUCAACC
.............(((..((((.((((((.(((((((...........((((((...)))))).......)))))))))).))).)))).)))

Structure

cuggguugggcaa   GC    C   -   U       GUcuuacugaa      c 
             ggU  GGGG UAG GGC AACAGCA           gguuuc  
             |||  |||| ||| ||| |||||||           |||||| u
             CCA  CUCC AUC CCG UUGUCgu           ccaaag  
-------------   -A    A   A   -       ----acacgca      g 

Annotation confidence High

Genome context

11: 54752349-54752441 [+]

Mature eca-miR-744-5p

• Accession: MIMAT0034644
• Description: Equus caballus eca-miR-744-5p mature miRNA
• Sequence: 16 - UGCGGGGCUAGGGCUAACAGCAGU - 39
• Evidence: experimental ; Illumina [1]

Mature eca-miR-744-3p

• Accession: MIMAT0051545
• Description: Equus caballus eca-miR-744-3p mature miRNA
• Sequence: 73 - CUGUUGCCACUAACCUCAACC - 93
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545