Stem-loop eca-mir-9099

Accession

MI0028276

Description

Equus caballus eca-mir-9099 precursor miRNA

Sequence

1 reads, 0 reads per million, 1 experiments

caggggucacuaggcuguuuagaggcuccuuguauuuacuccgcuggcucuguuguuccugggcuccuccaugucugCCCUUGGAAGCAGGUCUGGAGCagggagcaaggucagcuucccuaaagacuugagugacuac
....((((((((((((.....((((((((((((.(((.(((((..(((.((((..((((.((((............))))..)))))))))))))))).)))..))))))..)))))).....)).))).)))))))..

Structure

cagg       -   -  guuua      --      -a   a     cu   u    ug    -u    uccuc 
    ggucacu agg cu     gaggcu  ccuugu  uuu cuccg  ggc cugu  uucc  gggc     c
    ||||||| ||| ||     ||||||  ||||||  ||| |||||  ||| ||||  ||||  ||||      
    ucaguga uuc ga     cuucga  ggaacg  gga GAGGU  CUG GACG  AAGG  CCCg     a
--ca       g   a  aaucc      cu      ag   C     --   -    --    UU    ucugu 

Annotation confidence Not enough data

Genome context

chr11: 6019440-6019578 [-]

Mature eca-miR-9099

• Accession: MIMAT0034646
• Description: Equus caballus eca-miR-9099 mature miRNA
• Sequence: 78 - CCCUUGGAAGCAGGUCUGGAGC - 99
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545