Stem-loop eca-mir-9100

Accession

MI0028277

Description

Equus caballus eca-mir-9100 precursor miRNA

Sequence

9 reads, 1 reads per million, 1 experiments

ugcagagcuggguuugggagguuggaugcagcccugaguaUCAUUUGUAGGUUGUCCUGUGGAAAagccccgccugccccacgguucuuccaggacaaguggcugcagaucacucaggaaaguuguguaauucuucucucagcca
......((((((...((((((....((((((((((((((...((((((((.(((((((..((((.((((.............)))).))))))))))...).)))))))).)))))))...)))))))...))))))))))))..

Structure

ugcaga      uuu      uugg       ---       aUC        G ---      GU    A    ccgcc 
      gcuggg   gggagg    augcagc   ccugagu   AUUUGUAG U   UGUCCU  GGAA agcc     u
      ||||||   ||||||    |||||||   |||||||   |||||||| |   ||||||  |||| ||||     g
      cgacuc   ucuucu    uguguug   ggacuca   uagacguc g   acagga  ccuu uugg     c
----ac      ---      -uaa       aaa       --c        g uga      --    c    caccc 

Annotation confidence Not enough data

Genome context

chr11: 47178212-47178356 [-]

Mature eca-miR-9100

• Accession: MIMAT0034647
• Description: Equus caballus eca-miR-9100 mature miRNA
• Sequence: 41 - UCAUUUGUAGGUUGUCCUGUGGAAA - 65
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545