Stem-loop eca-mir-9103

Accession

MI0028280

Description

Equus caballus eca-mir-9103 precursor miRNA

Sequence

21 reads, 3 reads per million, 1 experiments

ugggaaguccuucuugaugucuaacuucaguaccuuucacuagccuuuggggaacagcucugacuuugggugcuuuagcaCCCAAGUCUUAUCUGUCUCAGGUUCcugacucaguacuuuaggcacuuuacagaugcagcuucuu
..((((((...(((((((((((((....(((((...(((..(((((...((((.(((....(((((.((((((....)))))))))))....))))))))))))..)))....))))))))))))..))).)))....)))))).

Structure

ug      -ccu   -   --       cuuc     -cuu   cu     uug    a   cucu     u      u 
  ggaagu    ucu uga  ugucuaa    aguac    uca  agccu   ggga cag    gacuu gggugc u
  ||||||    ||| |||  |||||||    |||||    |||  |||||   |||| |||    ||||| ||||||  
  ucuucg    aga auu  acggauu    ucaug    agu  UUGGA   CUCU GUC    CUGAA CCCacg u
-u      acgu   c   uc       ----     acuc   cC     ---    -   UAUU     -      a 

Annotation confidence Not enough data

Genome context

chr11: 24036392-24036536 [-]

Mature eca-miR-9103

• Accession: MIMAT0034650
• Description: Equus caballus eca-miR-9103 mature miRNA
• Sequence: 81 - CCCAAGUCUUAUCUGUCUCAGGUUC - 105
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545