Stem-loop eca-mir-9105

Accession

MI0028282

Description

Equus caballus eca-mir-9105 precursor miRNA

Sequence

5 reads, 1 reads per million, 1 experiments

ucacugagcgguagaagcggugugguggucgugggagcggUCUGAGACUUCGGCAUUGGGUaagcguuuuugggauuuauccgugacuugaggucucgccaggcguugaugccgcgagccguggccguugggagccg
...((.((((((....(((((...((((.(((.((.(((((..(((((((((((((.((((((((........).)))))))))).).))))))))))))..)).)).)))))))..))))).)))))).)).....

Structure

--uca  g      agaa     gug    u   g  a  --   CU         - -   U       - guu 
     cu agcggu    gcggu   gugg cgu gg gc  ggU  GAGACUUCG G CAU GGGUaag c   u
     || ||||||    |||||   |||| ||| || ||  |||  ||||||||| | ||| ||||||| |    
     gg uugccg    ugccg   cgcc gua uu cg  ccg  cucuggagu c gug ccuauuu g   u
gccga  g      ---g     -ag    -   g  g  ga   --         u a   -       a ggu 

Annotation confidence Not enough data

Genome context

chr11: 6266898-6267034 [+]

Mature eca-miR-9105

• Accession: MIMAT0034652
• Description: Equus caballus eca-miR-9105 mature miRNA
• Sequence: 41 - UCUGAGACUUCGGCAUUGGGU - 61
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545