Stem-loop eca-mir-9109

Accession

MI0028287

Description

Equus caballus eca-mir-9109 precursor miRNA

Sequence

1 reads, 0 reads per million, 1 experiments

ucaaccuggagcaacaacguucuuggcgcuuuuccggguguugggcucuccccuacucggaucguauccuaggaauguccUAACUGUGCCCGUGGGGAGAACUUCacccugagcccgggauuccguuccaagaacugcaaguuga
(((((.((.(........((((((((.((..((((((((...(((.(((((((....(((...((((..(((((...)))))...))))))).)))))))......)))...))))))))....)).))))))))).)).)))))

Structure

     c  g gcaacaac        c  --uu        guu   -----c       uacu   auc    -cc     a 
ucaac ug a        guucuugg gc    uuccgggu   ggg      ucucccc    cgg   guau   uagga  
||||| || |        |||||||| ||    ||||||||   |||      |||||||    |||   ||||   ||||| u
aguug ac u        caagaacc ug    agggcccg   ccc      AGAGGGG    GCC   CGUG   AUccu  
     a  g --------        u  ccuu        agu   aCUUCA       ---U   ---    UCA     g 

Annotation confidence Not enough data

Genome context

chr11: 5462806-5462950 [-]

Mature eca-miR-9109

• Accession: MIMAT0034657
• Description: Equus caballus eca-miR-9109 mature miRNA
• Sequence: 81 - UAACUGUGCCCGUGGGGAGAACUUC - 105
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545