Stem-loop eca-mir-9112

Accession

MI0028291

Description

Equus caballus eca-mir-9112 precursor miRNA

Sequence

39 reads, 6 reads per million, 1 experiments

uguuccgggcaccuguggagagcccaggcauccagggucuguugcuuuccuuuaaagucAGGCCAUGAUGCUCUCUGAGCCUGgguuaggagcagagaugaag
((((((.(((.((.((..((((....((((((...((((((..(((((.....)))))))))))..))))))))))..))..))))).)))))).........

Structure

---------      g   a  -u  gg    ccca      cag      uu     c 
         uguucc ggc cc  gu  agag    ggcauc   ggucug  gcuuu c
         |||||| ||| ||  ||  ||||    ||||||   ||||||  ||||| u
         acgagg uug gG  CG  UCUC    UCGUAG   CCGGAc  ugaaa u
gaaguagag      a   -  UC  AG    ----      -UA      --     u 

Annotation confidence Not enough data

Genome context

chr12: 25073375-25073477 [+]

Mature eca-miR-9112

• Accession: MIMAT0034661
• Description: Equus caballus eca-miR-9112 mature miRNA
• Sequence: 60 - AGGCCAUGAUGCUCUCUGAGCCUG - 83
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545