Stem-loop eca-mir-9131

Accession

MI0028314

Description

Equus caballus eca-mir-9131 precursor miRNA

Sequence

30 reads, 1.0 reads per million, 12 experiments

caggugccuucuguuggcgacugagcaggacugugugugaccuuugccuucccuccaguuauugcuggggccUGGAGGCGGUAACUGACGGUCCacgcccggccccagcucugcauggaccacuaguaa
..(((.((....(((((.(.(((.((.(((((((..((.(((...((((((.(((((((....)))))))...))))))))).))..)))))))..)).)))).))))).......)))))........

Structure

------ca   g  ---uucu     c a   a  -a       gu  g   uuu      --c       u 
        ggu cc       guugg g cug gc  ggacugu  gu acc   gccuuc   cuccagu a
        ||| ||       ||||| | ||| ||  |||||||  || |||   ||||||   |||||||  
        cca gg       cgacc c ggc cg  CCUGGCA  CA UGG   CGGAGG   ggggucg u
aaugauca   -  uacgucu     c -   c  ca       GU  A   ---      Ucc       u 

Annotation confidence Not enough data

Genome context

13: 727506-727634 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from eca-mir-9131

Mature eca-miR-9131-3p

• Accession: MIMAT0034682
• Description: Equus caballus eca-miR-9131-3p mature miRNA
• Sequence: 73 - UGGAGGCGGUAACUGACGGUCC - 94
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545