Stem-loop eca-mir-9133

Accession

MI0028316

Description

Equus caballus eca-mir-9133 precursor miRNA

Sequence

139 reads, 1.0 reads per million, 69 experiments

uucugggggccggcagagguggggcucguggucuugaggcUGUGGAGAGAGAUGAUCUGGCAgguuucccaugugCCUCUCGUCUUUUCUCCAggccguggccgcggugacaguugcuuuuaccaaagaagcauugagg
.....(((.((.((....)).)).)))((((((....((((.(((((((((((((...((((.((.....)).))))..))))).))))))))))))..)))))).....((((.((((((.....))))))))))...

Structure

-------uucugggggccggcagagguggggcuc      uuga    G        -     UCU    g  u 
                                  gugguc    ggcU UGGAGAGA GAUGA   GGCA gu u
                                  ||||||    |||| |||||||| |||||   |||| || c
                                  cgccgg    ccgg ACCUCUUU CUGCU   CCgu ua c
ggaguuacgaagaaaccauuuucguugacagugg      --ug    -        U     -CU    g  c 

Annotation confidence Medium

Genome context

13: 8978187-8978325 [-]

Mature eca-miR-9133-5p

• Accession: MIMAT0034684
• Description: Equus caballus eca-miR-9133-5p mature miRNA
• Sequence: 41 - UGUGGAGAGAGAUGAUCUGGCA - 62
• Evidence: experimental ; Illumina [1]

Mature eca-miR-9133-3p

• Accession: MIMAT0051552
• Description: Equus caballus eca-miR-9133-3p mature miRNA
• Sequence: 76 - CCUCUCGUCUUUUCUCCA - 93
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545