Stem-loop eca-mir-9134

Accession

MI0028317

Description

Equus caballus eca-mir-9134 precursor miRNA

Sequence

75 reads, 11 reads per million, 1 experiments

ggaugcacgcccagcgccagaucuuggauuguaagaccgcucucugccgaaggaaccagggccccUCGAAGGGAUGGCUGACUCCAGGCCggggcugggagagcccaaggugagc
((..((.(.((((((.((....((((((..((.((.(((.(((((..(((.((..(...)..)).))).)))))))))).))))))))..)).)))))).).)))).........

Structure

---------  au  a g      g  agau      uu  a  a   c     gc   a  aa c 
         gg  gc c cccagc cc    cuugga  gu ag ccg ucucu  cga gg  c  
         ||  || | |||||| ||    ||||||  || || ||| |||||  ||| ||  | a
         cc  cg g gggucg gg    GGACCU  CA UC GGU AGGGA  GCU cc  g  
cgaguggaa  --  a a      g  --CC      --  G  -   -     -A   c  cg g 

Annotation confidence Not enough data

Genome context

chr13: 6080527-6080641 [+]

Mature eca-miR-9134

• Accession: MIMAT0034685
• Description: Equus caballus eca-miR-9134 mature miRNA
• Sequence: 66 - UCGAAGGGAUGGCUGACUCCAGGCC - 90
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545