Stem-loop eca-mir-9137

Accession

MI0028320

Description

Equus caballus eca-mir-9137 precursor miRNA

Sequence

204 reads, 19.0 reads per million, 25 experiments

uaaucccccuuucugguuaauuaaauccucagacuggugcUGUGUUCCUAGCCUCUGGCCUCUcuguggggaggggggacuaccgggggaagguaggaacccagggcuuaucccuggGAAUGUGGGGUCCAGCAGGAGGCA
.....(((((..((((.........(((.(((...(((.(((.(((((((.((((((((((((((......)))))))....)))))))....))))))).))).))).....)))))).........)))).))).))..

Structure

uaauc  -   uu    uuaauuaaa   u   --acu   g   U       ---G       ----       gu 
     cc ccu  cugg         ucc cag     ggu cUG GUUCCUA    CCUCUGG    CCUCUcu  g
     || |||  ||||         ||| |||     ||| ||| |||||||    |||||||    |||||||   
     GG GGA  GACC         AGg guc     ucg gac caaggau    gggggcc    gggggga  g
---AC  A   -C    UGGGGUGUA   -   ccuau   g   c       ggaa       auca       gg 

Annotation confidence Low

Genome context

13: 20157559-20157699 [-]

Mature eca-miR-9137-5p

• Accession: MIMAT0034688
• Description: Equus caballus eca-miR-9137-5p mature miRNA
• Sequence: 41 - UGUGUUCCUAGCCUCUGGCCUCU - 63
• Evidence: experimental ; Illumina [1]

Mature eca-miR-9137-3p

• Accession: MIMAT0051554
• Description: Equus caballus eca-miR-9137-3p mature miRNA
• Sequence: 118 - GAAUGUGGGGUCCAGCAGGAGGCA - 141
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545