Stem-loop eca-mir-9140

Accession

MI0028324

Description

Equus caballus eca-mir-9140 precursor miRNA

Sequence

1 reads, 0 reads per million, 1 experiments

acagccccaucugucguaggcuggcccagggguggccggggaccuuggaccaggcagcagggaguggcugagccaUGCUGCACCCUGGGACCUCUGGCCUcccggcgagggucagaugccccgggaugggguggc
...(((((((((...(((..(((((((..(((.((((((((.....(..(((((..((((...(((((...))))).))))..)))))..))))))))).))).....))))))).)))....)))))))))...

Structure

aca         -guc   gg       ---ag   u        accuu ga     ca    gga     u 
   gccccaucu    gua  cuggccc     ggg ggccgggg     g  ccagg  gcag   guggc  
   |||||||||    |||  |||||||     ||| ||||||||     |  |||||  ||||   ||||| g
   ugggguagg    cgu  gacuggg     ccc CCGGUCUC     C  GGUCC  CGUC   Uaccg  
cgg         gccc   -a       agcgg   U        ----- AG     CA    --G     a 

Annotation confidence Not enough data

Genome context

chr13: 42100166-42100300 [-]

Mature eca-miR-9140

• Accession: MIMAT0034692
• Description: Equus caballus eca-miR-9140 mature miRNA
• Sequence: 76 - UGCUGCACCCUGGGACCUCUGGCCU - 100
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545