Stem-loop eca-mir-8908k-1

Accession

MI0028326

Description

Equus caballus eca-mir-8908k-1 precursor miRNA

Sequence

1125 reads, 170 reads per million, 1 experiments

uuccuccaccuugagccaugcagugugcagugcccUACCCAGAAUGGUGCCGAAUACUUAgucuacauguauucggcaccuucuggguagcguaaugcucaacacgaacgcuguucuuguuggccuuaugaccgg
..............((..((((...))))..)).((((((((((.((((((((((((...........))))))))))))))))))))))(((((.((.(((((.((((...)))).))))))).))))).....

Structure

-----------uuccuccaccuugagccaugcagugugcagugcc          U            UUAg 
                                             cUACCCAGAA GGUGCCGAAUAC    u
                                             |||||||||| ||||||||||||    c
                                             gaugggucuu ccacggcuuaug    u
ggccaguauuccgguuguucuugucgcaagcacaacucguaaugc          -            uaca 

Annotation confidence Not enough data

Genome context

chrX: 115865120-115865254 [-]

Clustered miRNAs

20 other miRNAs are < 10 kb from eca-mir-8908k-1

Mature eca-miR-8908k

• Accession: MIMAT0034694
• Description: Equus caballus eca-miR-8908k mature miRNA
• Sequence: 36 - UACCCAGAAUGGUGCCGAAUACUUA - 60
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545