Stem-loop eca-mir-8908d-1

Accession

MI0028330

Description

Equus caballus eca-mir-8908d-1 precursor miRNA

Sequence

6582 reads, 996 reads per million, 1 experiments

acuuugagccauucugugugcagugcccuacccgguaagguacugaucacuuacuuagacuacauguGAUCAGUGCCUGUCUGGGUGGAguaaugcucuacaagagcaacguuugggag
..(((((((..(((((((.(((.(((.((((((((..(((((((((((((...............)))))))))))))..)))))))).))).)))..))).))))....)))))))..

Structure

ac       --ca    -   -u   g   c        ua             uuacuu 
  uuugagc    uucu gug  gca ugc cuacccgg  agguacugaucac      a
  |||||||    |||| |||  ||| ||| ||||||||  |||||||||||||      g
  ggguuug    gaga cau  cgu aug GGUGGGUC  UCCGUGACUAGug      a
ga       caac    a   cu   a   A        UG             uacauc 

Annotation confidence Not enough data

Genome context

chrX: 115867856-115867974 [-]

Clustered miRNAs

21 other miRNAs are < 10 kb from eca-mir-8908d-1

Mature eca-miR-8908d

• Accession: MIMAT0034698
• Description: Equus caballus eca-miR-8908d mature miRNA
• Sequence: 68 - GAUCAGUGCCUGUCUGGGUGGA - 89
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545