Stem-loop eca-mir-2483

Accession

MI0028333

Description

Equus caballus eca-mir-2483 precursor miRNA

Sequence

8720 reads, 25.0 reads per million, 141 experiments

ggcuguaucuagaugacacccaaaaaugugagugaaaaguUCUGUCAACCAUCCAGCUGUUUGGggugaugcaaacaAACAUCUAGUUGGUUGAGAGAAuuuuuuacuuagucucuggguguuuuggagucauuuaacaggcu
(.((((...(((((((((((((......(((((((((((((((.(((((((.(.((.((((((............)))))).)).).))))))).))))))))))))))).....)))))........)))))))))))).).

Structure

- g    auc        --------     aaaaug               G       U C  C      Gggug 
 g cugu   uagaugac        accca      ugagugaaaaguUCU UCAACCA C AG UGUUUG     a
 | ||||   ||||||||        |||||      ||||||||||||||| ||||||| | || ||||||      
 c gaca   auuuacug        ugggu      auucauuuuuuAAGA AGUUGGU G UC ACAAac     u
u g    ---        agguuuug     -cucug               G       U A  U      aaacg 

Annotation confidence High

Genome context

X: 103584076-103584218 [-]

Mature eca-miR-2483-5p

• Accession: MIMAT0034700
• Description: Equus caballus eca-miR-2483-5p mature miRNA
• Sequence: 41 - UCUGUCAACCAUCCAGCUGUUUGG - 64
• Evidence: experimental ; Illumina [1]

Mature eca-miR-2483-3p

• Accession: MIMAT0051565
• Description: Equus caballus eca-miR-2483-3p mature miRNA
• Sequence: 78 - AACAUCUAGUUGGUUGAGAGAA - 99
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545