Stem-loop eca-mir-8908b-2

Accession

MI0028335

Description

Equus caballus eca-mir-8908b-2 precursor miRNA

Sequence

228450 reads, 367.0 reads per million, 120 experiments

ccaugcugugugcggugcagUAUCCAGAAGGUACUGAUCACucagccugcgugUAAUUAGUACCUGUCUGGGUAGAguacgcucaacaaga
......((((.(((.(((..(((((((((((((((((((((.((...)).)))..)))))))))).))))))))..)))))).).)))...

Structure

ccaugc   - u   g   ag        -          --   u  g 
      ugu g gcg ugc  UAUCCAGA AGGUACUGAU  CAC ca  
      ||| | ||| |||  |||||||| ||||||||||  ||| || c
      aca c cgc aug  AUGGGUCU UCCAUGAUUA  gug gu  
---aga   a u   -   AG        G          AU   c  c 

Annotation confidence High

Genome context

X: 119917898-119917989 [-]

Clustered miRNAs

19 other miRNAs are < 10 kb from eca-mir-8908b-2

Mature eca-miR-8908b-2-5p

• Accession: MIMAT0051561
• Description: Equus caballus eca-miR-8908b-2-5p mature miRNA
• Sequence: 21 - UAUCCAGAAGGUACUGAUCAC - 41
• Evidence: experimental ; Illumina [1]

Mature eca-miR-8908b-3p

• Accession: MIMAT0034697
• Description: Equus caballus eca-miR-8908b-3p mature miRNA
• Sequence: 54 - UAAUUAGUACCUGUCUGGGUAGA - 76
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545